Index

A

add_thermalized_kinetic_energy() (in module IDSimPy.preprocessing.ion_cloud_generation) animate_scatter_plot() (in module IDSimPy.analysis.visualization) animate_variable_scatter_plot() (in module IDSimPy.analysis.visualization)

animate_xz_density() (in module IDSimPy.analysis.visualization) animate_xz_density_comparison_plot() (in module IDSimPy.analysis.visualization) attribute_names (IDSimPy.analysis.trajectory.ParticleAttributes property)

C

center_of_charge() (in module IDSimPy.analysis.trajectory)

D

define_cylinder_x_dir() (in module IDSimPy.preprocessing.ion_cloud_generation) define_cylinder_z_dir() (in module IDSimPy.preprocessing.ion_cloud_generation)

define_origin_centered_block() (in module IDSimPy.preprocessing.ion_cloud_generation) define_xy_grid() (in module IDSimPy.preprocessing.ion_cloud_generation)

E

export_trajectory_to_vtk() (in module IDSimPy.analysis.trajectory)

F

file_version_id (IDSimPy.analysis.trajectory.Trajectory attribute)

filter_attribute() (in module IDSimPy.analysis.trajectory) filter_for_active_particles() (in module IDSimPy.analysis.trajectory)

G

generate_run_configurations_from_template() (in module IDSimPy.preprocessing.run_configuration_preprocessing) get() (IDSimPy.analysis.trajectory.ParticleAttributes method) get_attribs_for_particle() (IDSimPy.analysis.trajectory.ParticleAttributes method)

get_n_particles() (IDSimPy.analysis.trajectory.Trajectory method) get_particle() (IDSimPy.analysis.trajectory.Trajectory method) get_positions() (IDSimPy.analysis.trajectory.Trajectory method)

I

IDSimPy.analysis.chemistry module IDSimPy.analysis.trajectory module IDSimPy.analysis.visualization module IDSimPy.preprocessing.comsol_import module

IDSimPy.preprocessing.field_generation module IDSimPy.preprocessing.ion_cloud_generation module IDSimPy.preprocessing.run_configuration_preprocessing module import_comsol_3d_csv_grid() (in module IDSimPy.preprocessing.comsol_import) is_active_particle() (in module IDSimPy.analysis.trajectory)

M

module IDSimPy.analysis.chemistry IDSimPy.analysis.trajectory IDSimPy.analysis.visualization IDSimPy.preprocessing.comsol_import IDSimPy.preprocessing.field_generation IDSimPy.preprocessing.ion_cloud_generation IDSimPy.preprocessing.run_configuration_preprocessing

N

n_particles (IDSimPy.analysis.trajectory.Trajectory property)

number_of_attributes (IDSimPy.analysis.trajectory.ParticleAttributes property) number_of_timesteps (IDSimPy.analysis.trajectory.ParticleAttributes property)

O

OptionalAttribute (class in IDSimPy.analysis.trajectory)

P

parse_comsol_csv_data_chunk() (in module IDSimPy.preprocessing.comsol_import) parse_grid_vector() (in module IDSimPy.preprocessing.comsol_import) parse_spatial_dimensions() (in module IDSimPy.preprocessing.comsol_import) particle_attributes (IDSimPy.analysis.trajectory.Trajectory attribute) PARTICLE_CHARGES (IDSimPy.analysis.trajectory.OptionalAttribute attribute)

PARTICLE_MASSES (IDSimPy.analysis.trajectory.OptionalAttribute attribute) ParticleAttributes (class in IDSimPy.analysis.trajectory) plot_3d_grid() (in module IDSimPy.preprocessing.field_generation) plot_concentration_file() (in module IDSimPy.analysis.chemistry) plot_density_xz() (in module IDSimPy.analysis.visualization) plot_particle_traces() (in module IDSimPy.analysis.visualization)

R

random_sphere() (in module IDSimPy.preprocessing.ion_cloud_generation) read_concentration_file() (in module IDSimPy.analysis.chemistry) read_hdf5_trajectory_file() (in module IDSimPy.analysis.trajectory) read_json_trajectory_file() (in module IDSimPy.analysis.trajectory)

read_legacy_hdf5_trajectory_file() (in module IDSimPy.analysis.trajectory) read_trajectory_file_for_project() (in module IDSimPy.analysis.trajectory) render_scatter_animation() (in module IDSimPy.analysis.visualization) render_xz_density_animation() (in module IDSimPy.analysis.visualization) render_xz_density_comparison_animation() (in module IDSimPy.analysis.visualization)

S

select() (IDSimPy.analysis.trajectory.ParticleAttributes method) (in module IDSimPy.analysis.trajectory) set_kinetic_energy_in_z_dir() (in module IDSimPy.preprocessing.ion_cloud_generation) splat_positions (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) splat_states (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) splat_times (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute)

splat_velocities (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) start_positions (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) start_splat_data (IDSimPy.analysis.trajectory.Trajectory attribute) start_times (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) start_velocities (IDSimPy.analysis.trajectory.StartSplatTrackingData attribute) StartSplatTrackingData (class in IDSimPy.analysis.trajectory)

T

times (IDSimPy.analysis.trajectory.Trajectory attribute)

Trajectory (class in IDSimPy.analysis.trajectory) transform_2d_axial_to_3d() (in module IDSimPy.preprocessing.field_generation)

V

velo_from_kinetic_energy() (in module IDSimPy.preprocessing.ion_cloud_generation)

W

write_3d_scalar_fields_as_vtk_point_data() (in module IDSimPy.preprocessing.field_generation) write_3d_scalar_fields_to_hdf5() (in module IDSimPy.preprocessing.field_generation)

write_3d_vector_fields_as_vtk_point_data() (in module IDSimPy.preprocessing.field_generation) write_3d_vector_fields_to_hdf5() (in module IDSimPy.preprocessing.field_generation) write_cloud_file() (in module IDSimPy.preprocessing.ion_cloud_generation)